Research
Research
Research
Research
Software
We develop software for image processing, curation, quality assurance, and analysis. All software relies upon an open development model and "glass box" design. Together, these tools help accelerate reproducible neuroscience at scale.
QSIPrep is a complete BIDS-app for processing diffusion-weighted MRI (dMRI) data. QSIPrep is compatible with nearly any acquisition scheme, and provides both top-performing pre-processing and reconstruction methods.
QSIPrep
10k+
# downloaded
10k+
as of
8/3/22
XCP Engine provides post-processing for fMRI data that has been processed using fMRIPrep. Features include quality assurance, confound regression, and many derived measures including networks at multiple scales.
XCP Engine
6.8k
# downloaded
6.8k
as of
8/3/22
ASLPrep is a suite of software pipelines that ensure the reproducible and generalizable processing of ASL MRI data and quantification of brain perfusion.
ASLPrep
1.4k
# downloaded
1.4k
as of
8/3/22
A full-featured suite of tools for curating and organizing data in the Flywheel imaging database.
Flywheel Tools
47
# downloaded
47
as of
8/3/22
Multi Scale Network Regression is an R based tool to extract multivariate brain-phenotype relationships.
MSNR
1
# downloaded
1
as of
8/3/22
Curation of BIDS" (CuBIDS) is a sanity preserving workflow and software package that aids users in curating (checking and fixing) large, heterogeneous BIDS datasets. CuBIDS also functions as a BIDS dataset heterogeneity parser, complete with a number of customizable features.
CuBIDS
1
# downloaded
1
as of
8/3/22